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1

DNA barcoding for ecologists

Alice Valentini, François Pompanon, Pierre Taberlet

Journal:

Trends in Ecology & Evolution

Year:

2009

Language:

english

File:

PDF, 650 KB

english, 2009

2

Next-generation monitoring of aquatic biodiversity using environmental DNA metabarcoding

Valentini, Alice, Taberlet, Pierre, Miaud, Claude, Civade, Raphaël, Herder, Jelger, Thomsen, Philip Francis, Bellemain, Eva, Besnard, Aurélien, Coissac, Eric, Boyer, Frédéric, Gaboriaud, Coline, Jean,

Journal:

Molecular Ecology

Year:

2016

Language:

english

File:

PDF, 803 KB

english, 2016

3

Partially ablative radiotherapy (PAR) for large mass tumors using simultaneous integrated boost: A dose-escalation feasibility study

Cilla, Savino, Deodato, Francesco, Ianiro, Anna, Macchia, Gabriella, Picardi, Vincenzo, Buwenge, Milly, Cammelli, Silvia, Zamagni, Alice, Valentini, Vincenzo, Morganti, Alessio G.

Journal:

Journal of Applied Clinical Medical Physics

Year:

2018

Language:

english

File:

PDF, 661 KB

english, 2018

4

Analysing diet of small herbivores: the efficiency of DNA barcoding coupled with high-throughput pyrosequencing for deciphering the composition of complex plant mixtures

Eeva M Soininen, Alice Valentini, Eric Coissac, Christian Miquel, Ludovic Gielly, Christian Brochmann, Anne K Brysting, Jørn H Sønstebø, Rolf A Ims, Nigel G Yoccoz, Pierre Taberlet

Journal:

Frontiers in Zoology

Year:

2009

Language:

english

File:

PDF, 235 KB

english, 2009

5

Improved detection of an alien invasive species through environmental DNA barcoding: the example of the American bullfrog Lithobates catesbeianus

Tony Dejean, Alice Valentini, Christian Miquel, Pierre Taberlet, Eva Bellemain, Claude Miaud

Journal:

Journal of Applied Ecology

Year:

2012

Language:

english

File:

PDF, 250 KB

english, 2012

6

Genetic tracking of the brown bear in northern Pakistan and implications for conservation

Eva Bellemain, Muhammad Ali Nawaz, Alice Valentini, Jon E. Swenson, Pierre Taberlet

Journal:

Biological Conservation

Year:

2007

Language:

english

File:

PDF, 360 KB

english, 2007

7

Influence of management practices on large herbivore diet—Case of European bison in Białowieża Primeval Forest (Poland)

Rafał Kowalczyk, Pierre Taberlet, Eric Coissac, Alice Valentini, Christian Miquel, Tomasz Kamiński, Jan M. Wójcik

Journal:

Forest Ecology and Management

Year:

2011

Language:

english

File:

PDF, 276 KB

english, 2011

8

New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: the trnL approach

ALICE VALENTINI, CHRISTIAN MIQUEL, MUHAMMAD ALI NAWAZ, EVA BELLEMAIN, ERIC COISSAC, FRANÇOIS POMPANON, LUDOVIC GIELLY, CORINNE CRUAUD, GIUSEPPE NASCETTI, PATRICK WINCKER, JON E. SWENSON, PIERRE TABERL

Journal:

Molecular Ecology Resources

Year:

2009

Language:

english

File:

PDF, 251 KB

english, 2009

9

Universal DNA-Based Methods for Assessing the Diet of Grazing Livestock and Wildlife from Feces

Pegard, Anthony, Miquel, Christian, Valentini, Alice, Coissac, Eric, Bouvier, Frédéric, François, Dominique, Taberlet, Pierre, Engel, Erwan, Pompanon, François

Journal:

Journal of Agricultural and Food Chemistry

Year:

2009

Language:

english

File:

PDF, 843 KB

english, 2009

10

Plant functional traits reveal the relative contribution of habitat and food preferences to the diet of grasshoppers

Ibanez, Sébastien, Manneville, Olivier, Miquel, Christian, Taberlet, Pierre, Valentini, Alice, Aubert, Serge, Coissac, Eric, Colace, Marie-Pascale, Duparc, Quentin, Lavorel, Sandra, Moretti, Marco

Journal:

Year:

2013

Language:

english

File:

PDF, 794 KB

english, 2013

11

GENETIC RELATIONSHIPS AMONG ANISAKIS SPECIES (NEMATODA: ANISAKIDAE) INFERRED FROM MITOCHONDRIAL COX2 SEQUENCES, AND COMPARISON WITH ALLOZYME DATA

Valentini, Alice, Mattiucci, Simonetta, Bondanelli, Paola, Webb, Stephen C., Mignucci-Giannone, Antonio A., Colom-Llavina, Marlene M., Nascetti, Giuseppe

Journal:

Journal of Parasitology

Year:

2006

Language:

english

File:

PDF, 526 KB

english, 2006

12

Environmental DNA surveillance for invertebrate species: advantages and technical limitations to detect invasive crayfish Procambarus clarkii in freshwater ponds

Tréguier, Anne, Paillisson, Jean-Marc, Dejean, Tony, Valentini, Alice, Schlaepfer, Martin A., Roussel, Jean-Marc, Crispo, Erika

Journal:

Journal of Applied Ecology

Year:

2014

Language:

english

File:

PDF, 478 KB

english, 2014

13

Using eDNA to develop a national citizen science-based monitoring programme for the great crested newt (Triturus cristatus)

Biggs, Jeremy, Ewald, Naomi, Valentini, Alice, Gaboriaud, Coline, Dejean, Tony, Griffiths, Richard A., Foster, Jim, Wilkinson, John W., Arnell, Andy, Brotherton, Peter, Williams, Penny, Dunn, Francesc

Journal:

Biological Conservation

Year:

2015

Language:

english

File:

PDF, 823 KB

english, 2015

14

Occupational UV Exposure in French Outdoor Workers

Boniol, Mathieu, Koechlin, Alice, Boniol, Magali, Valentini, Faustine, Chignol, Marie-Christine, Doré, Jean-François, Bulliard, Jean-Luc, Milon, Antoine, Vernez, David

Journal:

Journal of Occupational & Environmental Medicine

Year:

2015

Language:

english

File:

PDF, 99 KB

english, 2015

15

DNA Barcoding for Honey Biodiversity

Valentini, Alice, Miquel, Christian, Taberlet, Pierre

Journal:

Year:

2010

Language:

english

File:

PDF, 196 KB

english, 2010

16

Genetic Relationships among Anisakis Species (Nematoda: Anisakidae) Inferred from Mitochondrial Cox2 Sequences, and Comparison with Allozyme Data

Alice Valentini, Simonetta Mattiucci, Paola Bondanelli, Stephen C. Webb, Antonio A. Mignucci-Giannone, Marlene M. Colom-Llavina and Giuseppe Nascetti

Journal:

Journal of Parasitology

Year:

2006

Language:

english

File:

PDF, 2.12 MB

english, 2006

17

Detection of a global aquatic invasive amphibian, Xenopus laevis, using environmental DNA

Secondi, Jean, Dejean, Tony, Valentini, Alice, Miaud, Claude, Audebaud, Benjamin

Journal:

Amphibia-Reptilia

Year:

2016

Language:

english

File:

PDF, 153 KB

english, 2016

18

Invasive North American bullfrogs transmit lethal fungusBatrachochytrium dendrobatidisinfections to native amphibian host species

Miaud, Claude, Dejean, Tony, Savard, Karine, Millery-Vigues, Annie, Valentini, Alice, Curt Grand Gaudin, Nadine, Garner, Trenton W. J.

Journal:

Biological Invasions

Year:

2016

Language:

english

File:

PDF, 445 KB

english, 2016

19

Anatomical UV Exposure in French Outdoor Workers

Vernez, David, Koechlin, Alice, Milon, Antoine, Boniol, Magali, Valentini, Faustine, Chignol, Marie-Christine, Dore, Jean-Francois, Bulliard, Jean-Luc, Boniol, Mathieu

Journal:

Journal of Occupational & Environmental Medicine

Year:

2015

Language:

english

File:

PDF, 279 KB

english, 2015

20

Trails of river monsters: Detecting critically endangered Mekong giant catfish Pangasianodon gigas using environmental DNA

Eva, Bellemain, Harmony, Patricio, Thomas, Gray, Francois, Guegan, Alice, Valentini, Claude, Miaud, Tony, Dejean

Journal:

Global Ecology and Conservation

Year:

2016

Language:

english

File:

PDF, 936 KB

english, 2016

21

eDNA metabarcoding: a promising method for anuran surveys in highly diverse tropical forests

Lopes, Carla M., Sasso, Thais, Valentini, Alice, Dejean, Tony, Martins, Marcio, Zamudio, Kelly R., Haddad, Célio F. B.

Journal:

Molecular Ecology Resources

Year:

2017

Language:

english

File:

PDF, 676 KB

english, 2017

22

Thermally-induced in situ growth of ZnO nanoparticles in polymeric fibrous membranes

Morselli, Davide, Valentini, Paola, Perotto, Giovanni, Scarpellini, Alice, Pompa, Pier Paolo, Athanassiou, Athanassia, Fragouli, Despina

Journal:

Composites Science and Technology

Year:

2017

Language:

english

File:

PDF, 2.34 MB

english, 2017

23

Environmental DNA characterization of amphibian communities in the Brazilian Atlantic forest: Potential application for conservation of a rich and threatened fauna

Sasso, Thais, Lopes, Carla M., Valentini, Alice, Dejean, Tony, Zamudio, Kelly R., Haddad, Célio F.B., Martins, Marcio

Journal:

Biological Conservation

Year:

2017

Language:

english

File:

PDF, 374 KB

english, 2017

24

Preliminary study of the air quality in operating rooms: do textiles have a role?

Totaro, Michele, Porretta, Andrea, Canale, Alice, Filippetti, Elisa, Tulipani, Alberto, Quattrone, Filippo, Giorgi, Serena, Costa, Anna Laura, Valentini, Paola, Casini, Beatrice, Privitera, Gaetano, B

Journal:

Journal of Hospital Infection

Year:

2018

Language:

english

File:

PDF, 324 KB

english, 2018

25

Unlocking biodiversity and conservation studies in high-diversity environments using environmental DNA (eDNA): A test with Guianese freshwater fishes

Cilleros, Kévin, Valentini, Alice, Allard, Luc, Dejean, Tony, Etienne, Roselyne, Grenouillet, Gaël, Iribar, Amaia, Taberlet, Pierre, Vigouroux, Régis, Brosse, Sébastien

Journal:

Molecular Ecology Resources

Year:

2018

Language:

english

File:

PDF, 1.28 MB

english, 2018

26

Spatial Representativeness of Environmental DNA Metabarcoding Signal for Fish Biodiversity Assessment in a Natural Freshwater System

Civade, Raphaël, Dejean, Tony, Valentini, Alice, Roset, Nicolas, Raymond, Jean-Claude, Bonin, Aurélie, Taberlet, Pierre, Pont, Didier, Garcia de Leaniz, Carlos

Journal:

Year:

2016

Language:

english

File:

PDF, 5.55 MB

english, 2016

27

No Evidence for the Effect of MHC on Male Mating Success in the Brown Bear

Kuduk, Katarzyna, Babik, Wieslaw, Bellemain, Eva, Valentini, Alice, Zedrosser, Andreas, Taberlet, Pierre, Kindberg, Jonas, Swenson, Jon E., Radwan, Jacek, Chaline, Nicolas

Journal:

Year:

2014

Language:

english

File:

PDF, 203 KB

english, 2014

28

Environmental DNA reveals quantitative patterns of fish biodiversity in large rivers despite its downstream transportation

Pont, Didier, Rocle, Mathieu, Valentini, Alice, Civade, Raphaël, Jean, Pauline, Maire, Anthony, Roset, Nicolas, Schabuss, Michael, Zornig, Horst, Dejean, Tony

Journal:

Scientific Reports

Year:

2018

Language:

english

File:

PDF, 1.62 MB

english, 2018

29

Pulmonary tuberculosis and lung cancer: simultaneous and sequential occurrence

Silva, Denise Rossato, Valentini Junior, Dirceu Felipe, Muller, Alice Manica, Almeida, Carlos Podalirio Borges de, Dalcin, Paulo de Tarso Roth

Journal:

Jornal Brasileiro de Pneumologia

Year:

2013

File:

PDF, 150 KB

2013

30

Milk cellularity and intramammary infections in primiparous and multiparous Lacaune ewes during early lactation

Takano, Paulo Vitor, de Cezaro Scapini, Vinícius André, Valentini, Talita, Kolling Girardini, Lilian, de Souza, Fernando Nogueira, Della Libera, Alice Maria Melville Paiva, Heinemann, Marcos Bryan, Ch

Journal:

Small Ruminant Research

Year:

2018

Language:

english

File:

PDF, 778 KB

english, 2018

31

Efficacy and safety of 3D-conformal half body irradiation in patients with multiple bone metastases

Macchia, Gabriella, Ferro, Milena, Cilla, Savino, Buwenge, Milly, Ianiro, Anna, Boccardi, Mariangela, Picardi, Vincenzo, Ferro, Marica, Arena, Eleonora, Zamagni, Alice, Cammelli, Silvia, Valentini, Vi

Journal:

Clinical and Experimental Metastasis

Year:

2018

Language:

english

File:

PDF, 643 KB

english, 2018

32

[ACM Press the 4th ACM Workshop - Munich, Germany (2018.06.10-2018.06.15)] Proceedings of the 4th ACM Workshop on Micro Aerial Vehicle Networks, Systems, and Applications - DroNet'18 - Surveying Areas in Developing Regions Through Context Aware Drone Mobility

Montanari, Alessandro, Kringberg, Fredrika, Valentini, Alice, Mascolo, Cecilia, Prorok, Amanda

Year:

2018

Language:

english

File:

PDF, 7.75 MB

english, 2018

33

Optimizing environmental DNA sampling effort for fish inventories in tropical streams and rivers

Cantera, Isabel, Cilleros, Kévin, Valentini, Alice, Cerdan, Axel, Dejean, Tony, Iribar, Amaia, Taberlet, Pierre, Vigouroux, Régis, Brosse, Sébastien

Journal:

Scientific Reports

Year:

2019

File:

PDF, 1.69 MB

2019

34

Risk-Reducing Bilateral Salpingo-Oophorectomy for BRCA Mutation Carriers and Hormonal Replacement Therapy: If It Should Rain, Better a Drizzle than a Storm

Gasparri, Maria Luisa, Taghavi, Katayoun, Fiacco, Enrico, Zuber, Veronica, Di Micco, Rosa, Gazzetta, Guglielmo, Valentini, Alice, Mueller, Michael D., Papadia, Andrea, Gentilini, Oreste D.

Journal:

Year:

2019

File:

PDF, 259 KB

2019

35

Exploiting multi-wavelength aerosol absorption coefficients in a multi-time source apportionment study to retrieve source-dependent absorption parameters

Forello, Alice C., Bernardoni, Vera, Calzolai, Giulia, Lucarelli, Franco, Massabò, Dario, Nava, Silvia, Pileci, Rosaria E., Prati, Paolo, Valentini, Sara, Valli, Gianluigi, Vecchi, Roberta

Journal:

Atmospheric Chemistry and Physics Discussions

Year:

2019

Language:

english

File:

PDF, 1.28 MB

english, 2019

36

Diet of the brown bear in Himalaya: Combining classical and molecular genetic techniques

Nawaz, Muhammad Ali, Valentini, Alice, Khan, Noor Kamal, Miquel, Christian, Taberlet, Pierre, Swenson, Jon E., Wang, De-Hua

Journal:

Year:

2019

Language:

english

File:

PDF, 1.21 MB

english, 2019

37

Diet of the brown bear in Himalaya: Combining classical and molecular genetic techniques

Nawaz, Muhammad Ali, Valentini, Alice, Khan, Noor Kamal, Miquel, Christian, Taberlet, Pierre, Swenson, Jon E., Wang, De-Hua

Journal:

Year:

2019

File:

PDF, 1.21 MB

2019

38

Correction: Diet of the brown bear in Himalaya: Combining classical and molecular genetic techniques

Nawaz, Muhammad Ali, Valentini, Alice, Khan, Noor Kamal, Miquel, Christian, Taberlet, Pierre, Swenson, Jon E.

Journal:

Year:

2020

File:

PDF, 217 KB

2020

39

Using environmental DNA for detection of Batrachochytrium salamandrivorans in natural water

Spitzen - van der Sluijs, Annemarieke, Stark, Tariq, DeJean, Tony, Verbrugghe, Elin, Herder, Jelger, Gilbert, Maarten, Janse, JÃ¶ran, Martel, An, Pasmans, Frank, Valentini, Alice

Journal:

Environmental DNA

Year:

2020

File:

PDF, 539 KB

2020

40

Environmental DNA metabarcoding for freshwater bivalves biodiversity assessment: methods and results for the Western Palearctic (European sub-region)

PriÃ©, Vincent, Valentini, Alice, Lopes-Lima, Manuel, Froufe, Elsa, Rocle, Mathieu, Poulet, Nicolas, Taberlet, Pierre, Dejean, Tony

Journal:

Year:

2020

File:

PDF, 2.43 MB

2020

41

Scaffold Repurposing of in-House Chemical Library toward the Identification of New Casein Kinase 1 Î´ Inhibitors

Cescon, Eleonora, Bolcato, Giovanni, Federico, Stephanie, Bissaro, Maicol, Valentini, Alice, Ferlin, Maria Grazia, Spalluto, Gianpiero, Sturlese, Mattia, Moro, Stefano

Journal:

ACS Medicinal Chemistry Letters

Year:

2020

File:

PDF, 941 KB

2020

42

Blind assessment of vertebrate taxonomic diversity across spatial scales by clustering environmental DNA metabarcoding sequences

Marques, Virginie, GuÃ©rin, Pierre-Ãdouard, Rocle, Mathieu, Valentini, Alice, Manel, StÃ©phanie, Mouillot, David, Dejean, Tony

Journal:

Year:

2020

File:

PDF, 3.37 MB

2020

43

Lost and found: frogs in a biodiversity hotspot rediscovered with environmental DNA

Lopes, Carla Martins, BaÃªta, DÃ©lio, Valentini, Alice, Lyra, Mariana LÃºcio, Sabbag, Ariadne Fares, Gasparini, JoÃ£o Luiz, Dejean, Tony, Haddad, CÃ©lio Fernando Baptista, Zamudio, Kelly Raquel

Journal:

Molecular Ecology

Year:

2020

File:

PDF, 1012 KB

2020

44

Applicability of benchtop multi-wavelength polar photometers to off-line measurements of the Multi-Angle Absorption Photometer (MAAP) samples

Valentini, Sara, Bernardoni, Vera, Bolzacchini, Ezio, Ciniglia, Davide, Ferrero, Luca, Forello, Alice Corina, MassabÃ³, Dario, Pandolfi, Marco, Prati, Paolo, Soldan, Francesca, Valli, Gianluigi, Yus-D

Journal:

Journal of Aerosol Science

Year:

2020

File:

PDF, 1.16 MB

2020

45

Morphological vs. DNA metabarcoding approaches for the evaluation of stream ecological status with benthic invertebrates: testing different combinations of markers and strategies of data filtering

Meyer, Albin, Boyer, FrÃ©dÃ©ric, Valentini, Alice, Bonin, AurÃ©lie, Ficetola, G. Francesco, Beisel, JeanâNicolas, Bouquerel, Jonathan, Wagner, Philippe, Gaboriaud, Coline, Leese, Florian, Dejean, To

Journal:

Molecular Ecology

Year:

2020

File:

PDF, 20.73 MB

2020

46

Intensity-Modulated Radiotherapy with Concomitant Boost After Breast Conserving Surgery: A Phase IâII Trial

Macchia, Gabriella, Cilla, Savino, Buwenge, Milly, Zamagni, Alice, Ammendolia, Ilario, Zamagni, Claudio, Frezza, Giovanni P, Valentini, Vincenzo, Deodato, Francesco, Morganti, Alessio G

Journal:

Breast Cancer Targets and Therapy

Year:

2020

File:

PDF, 383 KB

2020